Biology of Japanese encephalitis virus

 
Principal Investigator :  Sudhanshu Vrati

Project Associates / Assistants
Kaushik Bharati
Anjali Deo
Manish Rauthan

Ph D Students
Manisha Saini
Jyoti
Surender Vashist

Japanese encephalitis virus (JEV) is a member of the flaviviridae family of animal viruses that contains several other medically important viruses such as Dengue and Yellow fever. JEV is a major cause of human encephalitis and is responsible for considerable mortality and morbidity in India. Frequent epidemics of JEV are being reported from various parts of India and the virus has become endemic in several parts of the country. Different aspects of JEV biology are being studied in our laboratory, some of which are outlined below.

A.    Development of naked DNA based vaccine for JEV

The objective of this work is to develop naked DNA based immunization procedures for vaccination against JEV. To this end, we intend to make recombinant plasmids carrying various structural and non-structural protein genes of JEV under the control of a strong eukaryotic promoter. These plasmid constructs will be evaluated for their potential to generate protective immunity in experimental animals against JEV.

Plasmid constructs used in our earlier studies are based on a large plasmid pCEP4 of about 10 kilo bases (KB). During in vitro transfections, it is known that smaller plasmids have better transfection efficiency. We have now constructed a pcDNA vector (about 5 KB) based expression plasmid for JEV proteins. This vector synthesized JEV proteins in vitro as efficiently as the previous construct. We are now comparing the immunogenicity in mice of the two plasmids.

For carrying out the immunogenicity of the above DNA constructs in rhesus monkeys, we have established B-cell lines from at least two monkeys so far. This would enable us to do CTL assays following the DNA immunizations. More transformations are currently in progress to establish more B-cell lines.

Plasmid constructs have been made that should synthesize the non-structural NS1 protein besides the structural E and the M proteins of JEV. Proteins synthesized by these plasmids are being characterized by in vitro transfection of tissue cultured cells.

B.        Development of a tissue culture derived vaccine against JEV

A mouse brain derived vaccine using the Japanese Nakayama strain of JEV is currently being produced at the Central Research Institute, Kasauli. However, the cost of this vaccine precludes its large-scale usage for mass vaccination as may be required for the effective control of the virus activity in field. In order to bring down the cost of vaccine production, efforts are being made to grow the virus to high titers in tissue cultured cells.

Mice immunizations were carried out with tissue culture grown, formaline-inactivated JEV to test the potential of this virus for vaccine preparation in mice. Antibodies generated in mice neutralized the Indian (Vellore P20778) and the Japanese (JaOAr) strains of JEV, albeit with different titers. Immunized mice showed complete protection against the lethal JEV challenge.

C.    Interaction of cellular proteins with JEV RNA

JEV genome is a plus-sense single-stranded RNA of ~11 KB. A minus-sense RNA template is generated during virus replication, which is then copied to produce lots of plus-sense genomic RNA molecules. Based on the amino acid sequence homologies with other replicases, a couple of viral proteins have been speculated to be involved in replication of the JEV genome. However, we do not know if any of the cellular proteins also are needed for viral replication. We are, therefore, studying cellular proteins that interact with JEV genome sequences, which are likely to be involved in viral replication.

An 80-kDa protein identified as SV2A was found to interact with JEV RNA. The protein was synthesized in E.coli and the lysate was used to demonstrate the JEV NCR RNA interaction with SV2A. Antibodies to SV2A peptide were made and these are to be used for further confirming the SV2A binding to JEV genome. In an alternate effort to purify and identify the proteins in the neonatal mouse brain cell lysate that bind to JEV RNA, we fractionated the proteins contained in the lysate by the classical protein purification methods. These have resulted in partial purification of the proteins binding to JEV RNA. Efforts to purify the proteins further are in progress.

D.    Use of a self assembling plant virus protein for presenting antigenic peptides from Japanese encephalitis virus

Peptide vaccines have a number of potential advantages in terms of production, safety and stability. However, peptides are poorly immunogenic on their own and hence need to be presented with strong adjuvants such as Freund’s adjuvant. Such adjuvants are not permissible for use in humans and so there is need to identify newer adjuvants that may be safe and effective. Studies have shown that presentation of peptides in a highly ordered aggregate form can result in enhanced immune response. We are, therefore, investigating the use of a self-polymerizing coat protein from Johnson grass mosaic virus (JGMV) for presenting antigenic peptides from JEV.

Mice immunized with VLPs presenting a 27-amino acid sequence from the JEV E protein generated low titers of JEV neutralizing antibodies. Immunized mice showed about 60% protection against the lethal JEV challenge. We have now prepared VLPs presenting over 10 different JEV peptides. Mice have been immunized with these recombinant VLPs and their immunogenicity results are awaited.

E.    Use of adenovirus recombinant synthesizing Japanese encephalitis virus E protein for immunization against Japanese encephalitis:

Human adenoviruses cause mild, benign infections and in recent years these viruses are increasingly being used for human gene therapy and recombinant vaccine development. From the vaccine point of view, the added advantage that adenoviruses present is that they can be delivered orally. We are developing adenovirus recombinants that synthesise JEV E protein as potential vaccine candidate for immunization against Japanese encephalitis.

The cDNA encoding JEV E protein together with the prM protein was placed under the CMV promoter and this expression cassette was transferred to adenovirus shuttle vector. The JEV sequence was then inserted into the E1 transcription unit of human adenovirus 5. Recombinant adenovirus synthesizing JEV proteins have been produced in our laboratory and grown in bulk for immunization of mice.

Publications

Original peer-reviewed articles

1.     Saini M and Vrati S (2003) A Japanese encephalitis virus peptide present on Johnson grass mosaic virus-like particles induces virus-neutralizing antibodies and protects mice against lethal challenge. J Virol 77:3487-3494.

2.     Saini M and Vrati S (2003) High level expression of Johnson grass mosaic virus coat protein in E.coli and its auto-assembly to form virus-like particles. Protein Exp Purif 28:86-92.

3.     Rath A, Batra D, Kaur R, Vrati S and Gupta SK (2003) Characterization of immune response in mice to plasmid DNA encoding dog zona pellucida glycoprotein-3. Vaccine (in press).

4.     Kaur R and Vrati S (2003) Development of recombinant vaccine against Japanese encephalitis. J Neurovirol (in press).