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Publications 2019

Publications 2019

  1. Ahad A, Stevanin M, Smita S, Mishra GP, Gupta D, Waszak S, Sarkar UA, Basak S, Gupta B, Acha-Orbea H, Raghav SK. (2019) NCoR1: Putting the Brakes on the Dendritic Cell Immune Tolerance. iScience. 19: 996-1011.
  2. Ali A, Farooqui SR, Banerjea AC. (2019) The host cell ubiquitin ligase protein CHIP is a potent suppressor of HIV-1 replication. J Biol Chem. 294: 7283-7295.
  3. Arya R, Sharma B, Dhembla C, Pal RK, Patel AK, Sundd M, Ghosh B, Makde RD, Kundu S. (2019) A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation. Biochim Biophys Acta Proteins Proteom. 1867: 163-174.
  4. Bais SS, Ratra Y, Khan NA, Pandey R, Kushawaha PK, Tomar S, Medigeshi G, Singh A, Basak S. (2019) Chandipura virus
  5. utilizes the pro-survival function of RelA NF-κB for its propagation. J Virol. doi:10.1128/JVI.00081-19.
  6. Balyan R, Gund R, Chawla AS, Khare SP, Pradhan SJ, Rane S, Galande S, Durdik JM, George A, Bal V, Rath S. (2019) Correlation of cell-surface CD8 levels with function, phenotype and transcriptome of naive CD8 T cells. Immunology. 156: 384-401.
  7. Berger JM, Singh P, Khrimian L, Morgan DA, Chowdhury S, Arteaga-Solis E, Horvath TL, Domingos AI, Marsland AL, Yadav
  8. VK, Rahmouni K, Gao XB, Karsenty G. (2019) Mediation of the Acute Stress Response by the Skeleton. Cell Metab. 30: 890-902.
  9. Bhalla P, Shukla A, Vernekar DV, Arimbasseri AG, Sandhu KS, Bhargava P. (2019) Yeast PAF1 complex counters the pol III
  10. accumulation and replication stress on the tRNA genes. Sci Rep. 9(1): 12892.
  11. Bhasym A, Gurjar BS, Prabhu S, Puraswani M, Khandelwal P, Saini H, Saini S, Chatterjee P, Bal V, George A, Coshic P, Patidar G, Hari P, Sinha A, Bagga A, Rath S, Guchhait P. (2019) Altered Peripheral Blood Leucocyte Phenotype and Responses in Healthy Individuals with Homozygous Deletion of FHR1 and FHR3 Genes. J Clin Immunol. doi: 10.1007/s10875-019-00619-2
  12. Bhattacharya I, Sen Sharma S, Majumdar SS. (2019) Pubertal orchestration of hormones and testis in primates. Mol Reprod
  13. Dev. 86(11): 1505-1530.
  14. Chatterjee B, Roy P, Sarkar UA, Zhao M, Ratra Y, Singh A, Chawla M, De S, Gomes J, Sen R, Basak S. (2019) Immune Differentiation Regulator p100 Tunes NF-κB Responses to TNF. Front Immunol. doi:10.3389/fimmu.2019.00997.
  15. Chandel TI, Zaidi N, Zaman M, Jahan I, Masroor A, Siddique IA, Nayeem SM, Ali M, Uversky VN, Khan RH. (2019) A multiparametric analysis of the synergistic impact of anti-Parkinson's drugs on the fibrillation of human serum albumin. Biochim Biophys Acta Proteins Proteom. 1867: 275-285
  16. Chaudhary P, Babu GS, Sobti RC, Gupta SK. (2019) HGF regulate HTR-8/SVneo trophoblastic cells migration/invasion under
  17. hypoxic conditions through increased HIF-1α expression via MAPK and PI3K pathways. J Cell Commun Signal. doi:10.1007/s12079-019-00505-x
  18. Chaudhary P, Malhotra SS, Babu GS, Sobti RC, Gupta SK (2019). HGF promotes HTR-8/SVneo cell migration through
  19. activation of MAPK/PKA signaling leading to up-regulation of WNT ligands and integrins that target β-catenin. Mol Cell Biochem. 453: 11-32.
  20. Das U, Singh E, Dharavath S, Tiruttani Subhramanyam UK, Pal RK, Vijayan R, Menon S, Kumar S, Gourinath S, Srinivasan A. (2019) Structural insights into the substrate binding mechanism of novel ArgA from Mycobacterium tuberculosis. Int J Biol Macromol. 125: 970-978.
  21. Dhar A, Chawla M, Chattopadhyay S, Oswal N, Umar D, Gupta S, Bal V, Rath S, George A, Arimbasseri GA, Basak S. (2019)
  22. Role of NF-kappaB2-p100 in regulatory T cellhomeostasis and activation. Sci Rep. 9: 13867.
  23. Dhawan S, Ghosh S, Ravinder R, Bais SS, Basak S, Krishnan NMA, Agarwal M, Banerjee M, Haridas V. (2019) Redox Sensitive Self-Assembling Dipeptide for Sustained Intracellular Drug Delivery. Bioconjug Chem. 30(9): 2458-2468.
  24. Di Somma A, Caterino M, Soni V, Agarwal M, Pasquale P, Zanetti S, Molicotti P, Cannas S, Nandicoori VK, Duilio A. (2019) The bifunctional protein GlmU is a key factor in biofilm formation induced by alkylating stress in Mycobacterium smegmatis. Res Microbiol. pii: S0923-2508(19)30034-8.
  25. Dutta A, Mazumder M, Alam M, Gourinath S, Sau AK. (2019) Metal-induced change incatalytic loop positioning in
  26. Helicobacter pylori arginase alters catalyticfunction. Biochem J. 476: 3595-3614.
  27. Dwivedi R, Aggarwal P, Bhavesh NS, Kaur KJ. (2019) Design of therapeutically improved analogue of the antimicrobial peptide, indolicidin, using a glycosylation strategy. Amino Acids. 51(10-11): 1443-1460.
  28. Giri S, Shaha C. (2019) Leishmania donovani parasite requires Atg8 protein for infectivity and survival under stress. Cell Death Dis. 10: 808.
  29. Grover R, Burse SA, Shankrit S, Aggarwal A, Kirty K, Narta K, Srivastav R, Ray AK, Malik G, Vats A, Motiani RK, Thukral L, Roy SS, Bhattacharya S, Sharma R, Natarajan K, Mukerji M, Pandey R, Gokhale RS, Natarajan VT. (2019) Myg1 exonuclease couples the nuclear and mitochondrial translational programs through RNA processing. Nucleic Acids Res. doi: 10.1093/nar/gkz371.
  30. Gupta A, Saqib M, Singh B, Pal L, Nishikanta A, Bhaskar S. (2019) Mycobacterium indicus pranii Induced Memory T-Cells in
  31. Lung Airways Are Sentinels for Improved Protection Against M.tb Infection. Front Immunol. 10: 2359.
  32. Gupta S, Basu S, Bal V, Rath S, George A. (2019) Gut IgA abundance in adult life is a major determinant of resistance to DSS-colitis and can compensate for the effects of inadequate maternal IgA received by neonates. Immunology. 158: 19-34.
  33. Hakiem OR, Parijat P, Tripathi P, Batra JK. (2019) Mechanism of HrcA function in heat shock regulation in Mycobacterium tuberculosis. Biochimie. doi:10.1016/j.biochi.2019.11.012.
  34. Jamil A, Aamir Mirza M, Anwer MK, Thakur PS, Alshahrani SM, Alshetaili AS, Telegaonkar S, Panda AK, Iqbal Z. (2019) Co-delivery of gemcitabine and simvastatin through PLGA polymeric nanoparticles for the treatment of pancreatic cancer : in-vitro characterization, cellular uptake, and pharmacokinetic studies. Drug Dev Ind Pharm. 45: 745-753.
  35. Jatana N, Ascher DB, Pires DEV, Gokhale RS, Thukral L. (2019) Human LC3 and GABARAP subfamily members achieve
  36. functional specificity via specific structural modulations. Autophagy. doi: 10.1080/15548627.2019.1606636.
  37. Jha B, Vyas R, Bhushan J, Sehgal D, Biswal BK. (2019) Structural insights into the substrate specificity of SP_0149, the substrate-binding protein of a methionine ABC transporter from Streptococcus pneumoniae. Acta Crystallogr F Struct Biol Commun. 75(Pt 7): 520-528.
  38. Joshi AC, Kaur P, Nair RK, Lele DS, Nandicoori VK, Gopal B. Selectivity among anti-σ factors by Mycobacterium tuberculosis ClpX influences intracellular levels of Extracytoplasmic Function σ factors. J Bacteriol. doi: 10.1128/JB.00748-18.
  39. Joonè CJ, Schulman ML, Fosgate GT, Plagis TA, Crafford JE, Gupta SK, Bertschinger HJ. (2019) Antigen-specific CD4(+) and CD8(+) T-cell responses in PBMC from pony mares immunized with either native or recombinant zona pellucida vaccines. Theriogenology. 126: 106-113
  40. Kanchan V, Katare YK, Panda AK. (2019) Corrigendum to "Role of alum in improving the immunogenicity of biodegradable
  41. polymer particle entrapped antigens" [Eur. J. Pharm. Sci., 38, (2009), 18-28]. Eur J Pharm Sci. 137: 105014.
  42. Kanodia P, Kaur G, Coshic P, Chatterjee K, Neeman T, George A, Rath S, Bal V, Prabhu SB. (2019) Characterization of biological variation of peripheral blood immune cytome in an Indian cohort. Sci Rep. 9(1): 14735.
  43. Kar M, Khan NA, Panwar A, Bais SS, Basak S, Goel R, Sopory S, Medigeshi GR. (2019) Zinc Chelation Specifically Inhibits Early Stages of Dengue Virus Replication by Activation of NF-κB and Induction of Antiviral Response in Epithelial Cells. Front Immunol. doi: 10.3389/fimmu.2019.02347..
  44. Karan S, Mohapatra A, Sahoo PK, Garg LC, Dixit A. (2019) Structural-functional characterization of recombinant
  45. Apolipoprotein A-I from Labeo rohita demonstrates heat-resistant antimicrobial activity. Appl Microbiol Biotechnol. doi: 10.1007/s00253-019-10204-7.
  46. Kaushal N, Kumari S, Jhelum H, Sehgal D. (2019) In vitro and in vivo characterization of the interaction, proinflammatory,
  47. immunomodulatory and antigenic properties of capsular polysaccharide from Streptococcus pneumoniae serotype 1. Int J Biol Macromol. doi:10.1016/j.ijbiomac.2019.12.022.
  48. Kaushik H, Deshmukh SK, Solanki AK, Bhatia B, Tiwari A, Garg LC. (2019) Immunization with recombinant fusion of LTB and
  49. linear epitope (40-62) of epsilon toxin elicits protective immune response against the epsilon toxin of Clostridium perfringens type D. AMB Express. 9:105.
  50. Kaur P, Rausch M, Malakar B, Watson U, Damle NP, Chawla Y, Srinivasan S, Sharma K, Schneider T, Jhingan GD, Saini D,
  51. Mohanty D, Grein F, Nandicoori VK. (2019) LipidII nteraction with specific residues of Mycobacterium tuberculosis PknB extracytoplasmic domain governs its optimal activation. Nat Commun. doi: 10.1038/s41467-019-09223-9
  52. Khalsa JK, Chawla AS, Prabhu SB, Vats M, Dhar A, Dev G, Das N, Mukherjee S, Durdik JM, Bal V, George A, Rath S,
  53. Arimbasseri GA. (2019) Functionally significant metabolic differences between B and T lymphocyte lineages. Immunology. 158(2): 104-120.
  54. Khan J, Salhotra S, Goswami P, Akhter J, Jahan S, Gupta S, Sharma S, Banerjee BD, Parvez S, Gupta S, Raisuddin S. (2019)
  55. Bisphenol a triggers axonal injury and myelindegeneration with concomitant neurobehavioral toxicity in C57BL/6J male mice. Toxicology. 428: 152299.
  56. Kumar P, Bhaskar S. (2019) Myeloid differentiation primary response protein 88(MyD88)-deficient dendritic cells exhibit a
  57. skewed cytokine response to BCG. BMC Res Notes. doi: 10.1186/s13104-019-4086-6
  58. Kumar B, Verma S, Kashif M, Sharma R, Atul, Dixit R, Singh AP, Pande V, Saxena AK, Abid M, Pandey KC. (2019) Metacaspase-3 of Plasmodium falciparum: An atypical trypsin-like serine protease. Int J Biol Macromol. 138: 309-320.
  59. Kumar P, Das G, Bhaskar S. (2019) Mycobacterium indicus pranii therapy induces tumor regression in MyD88 - and TLR2-dependent manner. BMC Res Notes. 12(1): 648.
  60. Kumar R, Singh M, Meena J, Singhvi P, Thiyagarajan D, Saneja A, Panda AK. (2019) Hyaluronic acid - dihydroartemisinin conjugate: Synthesis, characterization and in vitro evaluation in lung cancer cells. Int J Biol Macromol. S0141-8130(19): 31043-8.
  61. Kumari R, Deshmukh RS, Das S. (2019) Caspase-10 inhibits ATP-citrate lyase-mediated metabolic and epigenetic
  62. reprogramming to suppress tumorigenesis. Nat Commun. 10(1):4255.
  63. Kumar S, Dhembla C P H, Sundd M, Patel AK. (2019) Differential expression of structural and functional proteins during bean common mosaic virus-host plantinteraction. Microb Pathog. 138:103812.
  64. Kumar N, Mukhopadhyay A. (2019) Using ChIP-Based Approaches to Characterize FOXORecruitment to its Target Promoters. Methods Mol Biol. 1890: 115-130
  65. Manglani K, Vijayan V, Pathak C, Khandelwal M, Singh P, Chellappa S, Yadav VK, Surolia A, Gupta S. (2019) Development and characterization of supramolecular calcitonin assembly and assessment of its interactions with the bone remodelling process. Bone. 122: 123-135.
  66. Majumdar T, Sharma S, Kumar M, Hussain MA, Chauhan N, Kalia I, Sahu AK, Rana VS, Bharti R, Haldar AK, Singh AP,
  67. Mazumder S. (2019) Tryptophan-kynurenine pathwayattenuates β-catenin-dependent pro-parasitic role of STING-TICAM2-IRF3-IDO1signalosome in Toxoplasma gondii infection. Cell Death Dis. 10: 161.
  68. Matai L, Sarkar GC, Chamoli M, Malik Y, Kumar SS, Rautela U, Jana NR, Chakraborty K, Mukhopadhyay A. (2019) Dietary
  69. restriction improves proteostasis and increases life span through endoplasmic reticulum hormesis. Proc Natl Acad Sci U S
  70. A. 116(35): 17383-17392.
  71. Mishra R, Lata S, Ali A, Banerjea A C. (2019) Dengue haemorrhagic fever : a job done via exosomes? Emerging Microbes & Infections. 8(1): 1626-163.
  72. Misra R, Menon D, Arora G, Virmani R, Gaur M, Naz S, Jaisinghani N, Bhaduri A, Bothra A, Maji A, Singhal A, Karwal P, Hentschker C, Becher D, Rao V, Nandicoori VK, Gandotra S, Singh Y. (2019) Tuning the Mycobacterium tuberculosis Alternative Sigma Factor SigF through the Multidomain Regulator Rv1364c and Osmosensory Kinase Protein Kinase D. J Bacteriol. 211: e00725-18.
  73. Nagpal PS, Kesarwani A, Sahu P, Upadhyay P. (2019) Aerosol immunization by alginate coated mycobacterium (BCG/MIP)
  74. particles provide enhanced immune response and protective efficacy than aerosol of plain mycobacterium against M.tb. H37Rv infection in mice. BMC Infect Dis. 19: 568.
  75. Naiyer A, Islam A, Hassan MI, Ahmad F, Sundd M. (2019) Backbone and side chain (1)H, (15)N and (13)C chemical shift
  76. assignments of the molten globule state of L94G mutant of horse cytochrome-c. Biomol NMR Assign. doi:10.1007/s12104-019-09917-7.
  77. Pal M, Khan J, Kumar R, Surolia A, Gupta S. (2019) Testosterone supplementation improves insulin responsiveness in HFD fed male T2DM mice and potentiates insulin signaling in the skeletal muscle and C2C12 myocyte cell line. PLoS One. 14: e0224162.
  78. Pal S, Medatwal N, Kumar S, Kar A, Komalla V, Yavvari PS, Mishra D, Rizvi ZA, Nandan S, Malakar D, Pillai M, Awasthi A, Das
  79. P, Sharma RD, Srivastava A, Sengupta S, Dasgupta U, Bajaj A. (2019) A Localized Chimeric Hydrogel Therapy Combats Tumor Progression through Alteration of Sphingolipid Metabolism. ACS Cent Sci. 5(10): 1648-1662.
  80. Parween F, Yadav J, Qadri A. (2019) The Virulence Polysaccharide of Salmonella Typhi Suppresses Activation of Rho Family
  81. GTPases to Limit Inflammatory Responses From Epithelial Cells. Front Cell Infect Microbiol. 9: 141.
  82. Pradhan BS, Bhattacharya I, Sarkar R, Majumdar SS. (2019) Downregulation of Sostdc1 in Testicular Sertoli Cells is Prerequisite for Onset of Robust Spermatogenesis at Puberty. Sci Rep. 9(1): 11458.
  83. Pradhan S, Kalia I, Roy SS, Singh OP, Adak T, Singh AP, Dhar SK. (2019) Molecular characterization and expression profile of an alternate proliferating cell nuclear antigen homolog PbPCNA2 in Plasmodium berghei. IUBMB Life. 71(9): 1293-1301.
  84. Prasad D, Arora D, Nandicoori VK, Muniyappa K. (2019) Elucidating the functional role of Mycobacterium smegmatis recX in stress response. Sci Rep. 9: 10912.
  85. Pitale DM, Gendalur NS, Descoteaux A, Shaha C. (2019) Leishmania donovani Induces Autophagy in Human Blood-Derived Neutrophils. J Immunol. doi: 10.4049/jimmunol.1801053
  86. Rajan S, Pandita E, Mittal M, Sau AK. (2019) Understanding the lower GMP formation in large GTPase hGBP-2 and role of its individual domains in regulation of GTP hydrolysis. FEBS J. doi: 10.1111/febs.14957.
  87. Ranjan V, Mishra A, Kesarwani A, Mohan KV, Lal SN, Puliyel J, Upadhyay P. (2019) Mother-to-Child Transfer of Reactivated Varicella-Zoster Virus DNA and Varicella-Zoster IgG in Pregnancy. Viral Immunol. doi:10.1089/vim.2019.0090.
  88. Ronsard L, Sood V, Yousif AS, Ramesh J, Shankar V, Das J, Sumi N, Rai T, Mohankumar K, Sridharan S, Dorschel A, Ramachandran VG, Banerjea AC. (2019) Genetic Polymorphisms in the Open Reading Frame of the CCR5 gene From HIV-1 Seronegative and Seropositive Individuals From National Capital Regions of India. Sci Rep. 9: 7594.
  89. Ronsard L, Yousif AS, Ramesh J, Sumi N, Gorman M, Ramachandran VG, Banerjea AC. (2019) In-Vitro Subtype-Specific
  90. Modulation of HIV-1 Trans-Activator of Transcription (Tat) on RNAi Silencing Suppressor Activity and Cell Death. Viruses. doi: 10.3390/v11110976.
  91. Saneja A, Kumar R, Mintoo MJ, Dubey RD, Sangwan PL, Mondhe DM, Panda AK, Gupta PN. (2019) Gemcitabine and
  92. betulinic acid co-encapsulated PLGA-PEG polymer nanoparticles for improved efficacy of cancer chemotherapy. Mater Sci Eng C Mater Biol Appl. 98: 764-771.
  93. Saqib M, Khatri R, Singh B, Gupta A, Bhaskar S. (2019) Cell wall fraction of Mycobacterium indicus pranii shows potential
  94. Th1 adjuvant activity. Int Immunopharmacol. 70: 408-416.
  95. Sevalkar RR, Arora D, Singh PR, Singh R, Nandicoori VK, Karthikeyan S, Sarkar D. (2019) Functioning of mycobacterial heat-shock repressors requires the master virulence regulator PhoP. J Bacteriol. doi: 10.1128/JB.00013-19.
  96. Shikha S, Gupta K, Shukla S ,Sampathkumar SG, Roy RP. (2019) Sortase-click strategy for defined protein conjugation on a heptavalent cyclodextrin scaffold. Plos One. doi:org./10/1371/journal.pone.0217369
  97. Shivappagowdar A, Pati S, Narayana C, Ayana R, Kaushik H, Sah R, Garg S, Khanna A, Kumari J, Garg L, Sagar R, Singh S. (2019) A small bioactive glycoside inhibits epsilon toxin and protects host cell death. Dis Model Mech. doi: 10.242/dmm.040410.
  98. Singh B, Saqib M, Chakraborty A, Bhaskar S. (2019) Lipoarabinomannan from Mycobacterium indicus pranii shows
  99. immunostimulatory activity and inducesautophagy in macrophages. PLoS One 14(10): e0224239.
  100. Srivastava A, Garg S, Jain R, Ayana R, Kaushik H, Garg L, Pati S, Singh S. (2019) Identification and functional characterization of a bacterial homologue of Zeta toxin in Leishmania donovani. FEBS Lett. doi:10.1002/1873-3468.13429.
  101. Tripathi V, Kaur E, Kharat SS, Hussain M, Damodaran AP, Kulshrestha S, Sengupta S. (2019) Abrogation of FBW7α-dependent p53 degradation enhances p53's function as a tumor suppressor. J Biol Chem. 294(36): 13224-13232.
  102. Vaish U, Kumar AA, Varshney S, Ghosh S, Sengupta S, Sood C, Kar HK, Sharma P, Natarajan VT, Gokhale RS, Rani R. (2019) Micro RNAs upregulated in Vitiligo skin play an important role in its aetiopathogenesis by altering TRP1 expression and keratinocyte-melanocytes cross-talk. Sci Rep. 9: 10079.
  103. Vashisht S, Verma S, Salunke DM. (2019) Cross-clade antibody reactivity may attenuate the ability of influenza virus to
  104. evade the immune response. Mol Immunol. 114: 149-161.
  105. Yadav K, Yavvari PS, Pal S, Kumar S, Mishra D, Gupta S, Mitra M, Soni V, Khare N, Sharma P, Srikanth CV, Kapil A, Singh A, Nandicoori VK, Bajaj A. (2019) Oral Delivery of Cholic Acid-Derived Amphiphile Helps in Combating Salmonella-Mediated Gut Infection and inflammation. Bioconjug Chem. doi: 10.1021/acs.bioconjchem.8b00880.